Cytosim  PI
Cytoskeleton Simulator
SphereProp Class Reference
Inheritance diagram for SphereProp:
Property

Public Member Functions

 SphereProp (const std::string &n)
 constructor
 
 ~SphereProp ()
 destructor
 
std::string kind () const
 identifies the property
 
void clear ()
 set default values
 
void read (Glossary &)
 set from a Glossary
 
void complete (SimulProp const *, PropertyList *)
 check and derive parameters
 
Propertyclone () const
 return a carbon copy of object
 
void write_data (std::ostream &) const
 write all values
 
- Public Member Functions inherited from Property
 Property (const std::string &n, const int index=-1)
 constructor must provide a name
 
virtual ~Property ()
 destructor
 
std::string name () const
 return identifier for instantiation
 
void name (const std::string &n)
 change name
 
bool is_named (const std::string &n)
 true if 'name' matches
 
int index () const
 index, unique among all Property of similar kind()
 
void index (int x)
 set index in the array of Properties
 
bool modified () const
 true if at least one value is different than its default setting
 
void readString (std::string &, char stamp)
 set from a string, return number of values assigned More...
 
void readFile (const char file[])
 set from a string, return number of values assigned
 
void write_diff (std::ostream &, const Property *ref) const
 write only values that differ from the ones specified in ref
 
void write_diff (std::ostream &, bool prune) const
 if ( prune == true ), write values that differ from the default values
 
void write (std::ostream &, bool prune=false) const
 write header + data More...
 

Public Attributes

real point_mobility
 mobility of points on the surface
 
real viscosity
 effective viscosity (if not specified, simul:viscosity is used)
 
bool piston_effect
 if true, use special formula to calculate mobilities More...
 
int steric
 flag to include steric interaction for this object
 
Confinement confine
 flag to confine this object
 
real confine_stiff
 confinement stiffness (this is specified as confine[1])
 
std::string confine_space
 name of space for confinement (this is specified as confine[2])
 
std::string display
 display parameters (see Display parameters: Points)
 
PointDispdisp
 parameters derived from string display
 

Friends

class Sphere
 

Additional Inherited Members

- Static Public Member Functions inherited from Property
template<typename C >
static void write_param (std::ostream &os, std::string const &name, C const &c)
 formatted output of one parameter
 
template<typename C >
static void write_param (std::ostream &os, std::string const &name, C const *c, int cnt)
 formatted output of one parameter
 
template<typename C , typename D >
static void write_param (std::ostream &os, std::string const &name, C const &c, D const &d)
 formatted output of one parameter
 
template<typename C , typename D , typename E >
static void write_param (std::ostream &os, std::string const &name, C const &c, D const &d, E const &e)
 formatted output of one parameter
 
template<typename C , typename D , typename E , typename F >
static void write_param (std::ostream &os, std::string const &name, C const &c, D const &d, E const &e, F const &f)
 formatted output of one parameter